Live R Coding Session - Spatial transcriptomics data analysis with STdeconvolve and SpotClean
1:49:47
YouTubeProf. Jean Fan
Live R Coding Session - Spatial transcriptomics data analysis with STdeconvolve and SpotClean
I record myself coding in the R programming language to perform an exploratory bioinformatics analysis of multi-cellular pixel resolution spatial transcriptomics Visium dataset from 10X Genomics using STdeconvolve with SpotClean preprocessing. I hope this will help give students a sense for how I would go about doing an exploratory ...
6K viewsNov 28, 2022
Shorts
EP67: A General Guide to Different Spatial Transcriptomics Technologies Part1 (Xenium, MERSCOPE)
25:40
394 views
EP67: A General Guide to Different Spatial Transcriptomics
BioTuring Team
Tutorial for Advanced Graph Neural Network Analysis for Spatial Transcriptomics
3:19
13 views
Tutorial for Advanced Graph Neural Network Analysis for Spatial Transcriptomics
AI-Bionexor
Spatial Analysis Methods
The Sun Blasted Space Dust 6 Million Miles Away
0:04
The Sun Blasted Space Dust 6 Million Miles Away
YouTubeSpatial Theory
69.4K views1 month ago
Einstein's Relativity: Unveiling Spacetime's Fourth Dimension #shorts
0:35
Einstein's Relativity: Unveiling Spacetime's Fourth Dimension #shorts
YouTubePastor Allen Nolan
6.4K views1 month ago
A Neutron Star This Close Would Stretch Earth with 8G of Tidal Force
0:06
A Neutron Star This Close Would Stretch Earth with 8G of Tidal Force
YouTubeSpatial Theory
42.5K views1 month ago
Top videos
Ben Raphael | Models and Methods for Spatial Transcriptomics | CGSI 2023
40:56
Ben Raphael | Models and Methods for Spatial Transcriptomics | CGSI 2023
YouTubeComputational Genomics
3.7K viewsFeb 12, 2025
Imaging based spatial transcriptomics methods preprocessing and quality control
59:56
Imaging based spatial transcriptomics methods preprocessing and quality control
YouTubeEMBL's European
493 views6 months ago
FRAP Webinar - Spatial Transcriptomics Technology
2:19:53
FRAP Webinar - Spatial Transcriptomics Technology
YouTubeFRAP Network - Cancer du
111 views3 months ago
Spatial analysis Spatial Data Visualization
This Black Hole Launched Twin Jets Spanning 23 Million Light Years
0:05
This Black Hole Launched Twin Jets Spanning 23 Million Light Years
YouTubeSpatial Theory
88.3K views1 month ago
Black Hole Jet at 8 Million mph Is Creating Stars
0:06
Black Hole Jet at 8 Million mph Is Creating Stars
YouTubeSpatial Theory
841.7K views2 months ago
A Black Hole Launched This Star at Almost 4 Million MPH
0:06
A Black Hole Launched This Star at Almost 4 Million MPH
YouTubeSpatial Theory
1.1M views1 month ago
Ben Raphael | Models and Methods for Spatial Transcriptomics | CGSI 2023
40:56
Ben Raphael | Models and Methods for Spatial Transcriptomics | CGSI 2023
3.7K viewsFeb 12, 2025
YouTubeComputational Genomics Summer Institute CGSI
Imaging based spatial transcriptomics methods preprocessing and quality control
59:56
Imaging based spatial transcriptomics methods preprocessing and quality control
493 views6 months ago
YouTubeEMBL's European Bioinformatics Institute EMBL-EBI
FRAP Webinar - Spatial Transcriptomics Technology
2:19:53
FRAP Webinar - Spatial Transcriptomics Technology
111 views3 months ago
YouTubeFRAP Network - Cancer du Pancréas
EP67: A General Guide to Different Spatial Transcriptomics Technologies Part1 (Xenium, MERSCOPE)
25:40
EP67: A General Guide to Different Spatial Transcriptomics Technologies Part1 (Xenium, MERSCOPE)
394 views6 months ago
YouTubeBioTuring Team
Tutorial for Advanced Graph Neural Network Analysis for Spatial Transcriptomics
3:19
Tutorial for Advanced Graph Neural Network Analysis for Spatial Transcriptomics
13 views3 months ago
YouTubeAI-Bionexor
Mapping biology in space a guide to technologies and workflows in spatial transcriptomics
1:00:19
Mapping biology in space a guide to technologies and workflows in spatial transcriptomics
686 views6 months ago
YouTubeEMBL's European Bioinformatics Institute EMBL-EBI
2026 cell types workshop/ Spatial Transcriptomics
1:13:26
2026 cell types workshop/ Spatial Transcriptomics
243 views3 months ago
YouTubeallen institute
1:06:49
Interactive visualisation of spatial transcriptomics data
225 views5 months ago
YouTubeEMBL's European Bioinformatics Institute EMBL-EBI
1:19:26
Using LLM for Biological Data | Single-cell RNA-seq & Spatial Transcriptomics | Kaggle Tutorial
187 viewsAug 16, 2025
YouTubeFahim Hafiz
See more
Static thumbnail place holder